Insertion junction: CLIP2.043706_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043706
Chromosome:chromosome 9
Location:2099946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396150 (1 of 33) IPR013830 - SGNH hydrolase-type esterase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCAGGGAGCCAGGGACACAGTTTGCATACTAGCCGTACCGGCAACAG
Internal bar code:GTTGTTCAACAAGGGGAGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:323
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGCTCGTTTTAGCTTGGT
Suggested primer 2:AGTCACAGTCTTTGCGCGTA