Insertion junction: CLIP2.043707_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043707
Chromosome:chromosome 12
Location:4839540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523500 DER1 DERLIN-1 involved in ER-associated degradation system; (1 of 2) K13989 - Derlin-2/3 (DERL2_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATAGGTTCGGGTGATGGGCGGCAGGCTCTCAAACCAAGCCCCTACAC
Internal bar code:TGGTTATTGATGACCATAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1663
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTAGTTGTCGTCGGGCT
Suggested primer 2:GGGGTGTGGTAGTGTGAGTG