Insertion junction: CLIP2.043711_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043711
Chromosome:chromosome 1
Location:3735677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024350 (1 of 2) PTHR10766//PTHR10766:SF49 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGCGCTCTGGTGGTGAAGTGCGTCTCGACTTCAGGCTCATGTAGCAG
Internal bar code:CCCCACCCTTCAGCTTTTGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3720
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGAACCGTCCTTGAGACA
Suggested primer 2:GGTCGAGGAGGACTGGTACT