Insertion junction: CLIP2.043712_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043712
Chromosome:chromosome 2
Location:6333949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387700 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGTTGTGTGTGTGAACCACCGCATGCCGCCCGACATGCACGCCTCTGT
Internal bar code:GAATAGGTAGTCTGGGATTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:328
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAACACCTACCGCCTGTG
Suggested primer 2:GTCCCAACCTGCACTAGTCC