Insertion junction: CLIP2.043717_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043717
Chromosome:chromosome 2
Location:6861022
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388504 (1 of 16) IPR003903 - Ubiquitin interacting motif CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGGTCGGTAGGGCCCCTGACGAGGCCGGCCCACGCATGGCTCCACA
Internal bar code:CAAAGAGCGGCGGGGGATTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4958
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCGCAGATGTTGACATG
Suggested primer 2:ATACGGACACAGGCAGGTTG