Insertion junction: CLIP2.043722_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043722
Chromosome:chromosome 7
Location:1457123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00052104

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTACGCCGTGTGGGGGGTCGGACTGAGAGGAGAGACTTGACCACAACA
Internal bar code:AAATGGGCCACTGCTATTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3513
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAATGGCGCCGTGTAAAG
Suggested primer 2:CTTCCAGGTGAGCCATGGTT