Insertion junction: CLIP2.043738_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043738
Chromosome:chromosome 1
Location:3308883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021300 (1 of 2) IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCCTAATGGAAATGAGGGTGGGGGAGGGTGCGCTGATGGTGCATGC
Internal bar code:TAGTAAGCCAACCGCATGCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:240
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGGAACTCGGCCAGACTG
Suggested primer 2:GAGGTCAAGGTGGGGAACTG