Insertion junction: CLIP2.043743_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043743
Chromosome:chromosome 9
Location:1507449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399551 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCCTGGTAGGCTGCCTCCTTCAGAGCCGCCGCGCCGTCCGCACCGCC
Internal bar code:TCCTTTTGGGACGGCCGTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1492
LEAP-Seq percent confirming:39.1304
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGGAGCATGTTCGAGAG
Suggested primer 2:GCTCCATCCAATCCCACCAA