Insertion junction: CLIP2.043749_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043749
Chromosome:chromosome 3
Location:1283811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150101 NRT2D Nitrate/nitrite transporter; (1 of 5) PTHR23515//PTHR23515:SF2 - FAMILY NOT NAMED // HIGH AFFINITY NITRATE TRANSPORTER 2.3-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCCAGCAGGCTGCAGCCAAAGTACTCGTTGTAGAAGGAGGGCAGCAT
Internal bar code:CGGAAATCCATACATTAGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2017
LEAP-Seq percent confirming:91.0448
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCTATTTGCGACACAGC
Suggested primer 2:GGTTCAGTCCCCATTACCCG