Insertion junction: CLIP2.043758_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043758
Chromosome:chromosome 7
Location:4416200
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343150 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCCATCGGCGGAGCCGAGCTGCGCTGGCACGGTTGAAGCAAACTCGC
Internal bar code:ATGAGAATTGGAAAGCTATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1620
LEAP-Seq percent confirming:55.3191
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTGGTGAGTGATCTGCA
Suggested primer 2:AGTTGGACCTCTTTGGCTCG