Insertion junction: CLIP2.043759_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043759
Chromosome:chromosome 2
Location:5588411
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115400 (1 of 2) IPR002889//IPR008979 - Carbohydrate-binding WSC // Galactose-binding domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTGGGGTGCCATGGGTCTTCTGGCGCCAACACGCCCGCGTGTGCTGC
Internal bar code:TGGTTTGGCCGAAGCAGGACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1730
LEAP-Seq percent confirming:70.8738
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:103

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTAGGTGATGCGGTAGC
Suggested primer 2:TGCGGCGTAGATACCATGAC