Insertion junction: CLIP2.043759_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043759
Chromosome:chromosome 2
Location:5588413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115400 (1 of 2) IPR002889//IPR008979 - Carbohydrate-binding WSC // Galactose-binding domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCCATGAACCCAACCGGCCCTAAGCTCGTCCCTGCCCTCTGAACGTG
Internal bar code:TGGTTTGGCCGAAGCAGGACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1810
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGCGTAGATACCATGAC
Suggested primer 2:GGAGTAGGTGATGCGGTAGC