Insertion junction: CLIP2.043771_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043771
Chromosome:chromosome 3
Location:8334964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199100 (1 of 7) IPR001606 - ARID DNA-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAAGTTGGAGGGTCTGTGGAGGCGGCGGAAGCTGCCGGGCAGCAGTA
Internal bar code:GGGGGTATATGGGATATCCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2540
LEAP-Seq percent confirming:69.7674
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGCAAGTACCCGGTAA
Suggested primer 2:GACGACGACCCGCTTATCTC