Insertion junction: CLIP2.043780_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043780
Chromosome:chromosome 1
Location:2153586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g012000 (1 of 3) IPR000953//IPR016197 - Chromo/chromo shadow domain // Chromo domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTTTGTGTGTGTGTGTGTGTGTGTGCATGCGTGTATGCGTGATTTA
Internal bar code:CGTAATCACCGGGTGTCGACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3118
LEAP-Seq percent confirming:0.877193
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:113
LEAP-Seq n unique pos:114

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAATTCTCCCCGTATCGT
Suggested primer 2:GGAAGGTGGGCACAGAATCA