Insertion junction: CLIP2.043792_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043792
Chromosome:chromosome 3
Location:822360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146347 (1 of 3) PTHR11220//PTHR11220:SF1 - HEME-BINDING PROTEIN-RELATED // HEME-BINDING PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCATGCTGCCTGCGCTGCCACCCCCTTGGCCCCAGGCGGCACGAATG
Internal bar code:TGTCCTGAAGGCGCGTCGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1033
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGAAGGAGGCTCTGTC
Suggested primer 2:CAAAGTTGGGACACAGCTGC