Insertion junction: CLIP2.043793_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043793
Chromosome:chromosome 9
Location:5955783
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412175 (1 of 2) 3.7.1.8 - 2,6-dioxo-6-phenylhexa-3-enoate hydrolase / HOHPDA hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACCACCTCATCCAGACACACGCTGCACACCTCCACACACACACATAC
Internal bar code:ATTTTCAGAAAGGTGTCGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:531
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTACACGCCCCGAATAT
Suggested primer 2:CAGGAGGGCAGGTGGTTAAG