Insertion junction: CLIP2.043798_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043798
Chromosome:chromosome 2
Location:5715052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116400 FAP120,DII7 Flagellar Associated Protein 120; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACAGGGCTGGGCGGGGTGCGGGATGTGGGGAAGTGGGAGTTGCATTC
Internal bar code:AGGGTACAGGCAGCACACACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:964
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACACTGCATGCCTTCCA
Suggested primer 2:GCTGCCCTAGTGTGTTCGAT