Insertion junction: CLIP2.043799_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043799
Chromosome:contig 28
Location:29365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre28.g802191 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACAAGCCCAGTTGATTGCGCCTGTTGCATAAATGACATAAGCCGTGGC
Internal bar code:CGGAAAAATGCAAGTTAACGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2974
LEAP-Seq percent confirming:14.6341
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTACGTCTCTCCTTCCC
Suggested primer 2:CGCAATGCATTACCTGGAGC