Insertion junction: CLIP2.043801_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043801
Chromosome:chromosome 4
Location:2283009
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGGGCTCGGGGAACCGGAATAGGTGAGAGATACGGTAGTAAGGGGAG
Internal bar code:GGGTTTCAGCGACTAGTGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAAAGGAATCGCTGGTGG
Suggested primer 2:TGTTCGTGCATGGGATGACA