Insertion junction: CLIP2.043805_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043805
Chromosome:chromosome 2
Location:6380099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387950 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTATTAGTGCGGCGGCCTGTAGAACAACTCGCGTGCCGTTTGGGCCCAG
Internal bar code:CAGTGGGCAAGCTATTTTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3667
LEAP-Seq percent confirming:91.7808
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:AATGATGCAGGTCCAGGTGG
Suggested primer 2:CAACTGGCACCAAGTTCTGC