Insertion junction: CLIP2.043806_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043806
Chromosome:chromosome 13
Location:3025259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801543 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGGCAGCTTGCGTTGCGGTCCGTGCCCCCTGCACGTCTGTCACCAC
Internal bar code:GAGACTCGATGGCGCTAAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1005
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCCTTCGTCTCCTTCAC
Suggested primer 2:ATGTGTCTACGCTAGCGAGC