Insertion junction: CLIP2.043810_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043810
Chromosome:chromosome 1
Location:1328230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g006900 (1 of 6) PTHR22870//PTHR22870:SF201 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACCTGCCCGCACGCTGCTGCATCACCACCATGCGCTTGTTTGCTGCGG
Internal bar code:GATGTTTTGTCTGCTATCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:938
LEAP-Seq percent confirming:76.1905
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TATCTGGAGCGGACTCACCA
Suggested primer 2:AGGTGAAGGATGGGCATTGG