Insertion junction: CLIP2.043812_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043812
Chromosome:chromosome 10
Location:5026011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g454700 (1 of 1) IPR001611//IPR003591//IPR025875 - Leucine-rich repeat // Leucine-rich repeat, typical subtype // Leucine rich repeat 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCCGGCCCACGAGTGCCGGGAGGTCGGTTCCCAAGAAGCTGACTGG
Internal bar code:AATCTTGGATTTTCCCTTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3484
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAACCACTGCCCACATTG
Suggested primer 2:AGGAGGACGAGGTAGAGCTG