Insertion junction: CLIP2.043814_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043814
Chromosome:chromosome 9
Location:1188882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401022 SNE3, UXE,UXE1 UDP-xylose-4-epimerase; (1 of 1) K12448 - UDP-arabinose 4-epimerase (UXE, uxe) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACCCTTGCCATGAGGCGGCAACGCCACCAACACACCAAGCCCAGCTCT
Internal bar code:TTGGATCAGATCTCTTGGAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2084
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGAGGTTGGGGTCCAGG
Suggested primer 2:GAAAGGGAGGGAGGAAAGGC