Insertion junction: CLIP2.043816_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043816
Chromosome:chromosome 16
Location:1137078
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649900 HTR40,HTR24 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGGACTTCAAGACCGACCTGCGTTTCCAGAGCCAGGCCGTGCTGGCG
Internal bar code:CGTACCCTAAATGCCACAAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1595
LEAP-Seq percent confirming:64.5161
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TACCAGCTACCCCCTAACCC
Suggested primer 2:TCCAGGAACGTCTTCAGCAC