Insertion junction: CLIP2.043831_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043831
Chromosome:chromosome 7
Location:2438717
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329050 NCD7,AOC5 Cationic amino acid transporter; (1 of 2) K03294 - basic amino acid/polyamine antiporter, APA family (TC.APA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATGCTTCATATATCACAAAACGGCGAGTCGATTTGTGTTCGCGTGTC
Internal bar code:GGCAGCTAGGAGAAAAGATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3501
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCATTCAGCCAGCTCCA
Suggested primer 2:TCACGGGGAGAAGAAAACGG