Insertion junction: CLIP2.043833_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043833
Chromosome:chromosome 12
Location:9401091
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541450 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGGAGAGCGCGGGTGGCGAACATCAGGTGGAGGTGCAGCAGATGCAT
Internal bar code:GATCCACAGACCGGAGCTTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:229
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GATGACTCGCCCCTGCTATC
Suggested primer 2:TATGACCAGCTCGACCAGGA