Insertion junction: CLIP2.043842_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043842
Chromosome:chromosome 12
Location:9191607
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543302 (1 of 6) IPR001245//IPR011009 - Serine-threonine/tyrosine-protein kinase catalytic domain // Protein kinase-like domain CDS
Cre12.g801488 (1 of 6) IPR001245//IPR011009 - Serine-threonine/tyrosine-protein kinase catalytic domain // Protein kinase-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGCTCGTTCACGAGCAGGTCGGTGTGGGGGCGCGCGCGAACGCATG
Internal bar code:GCTAGGATGGGGCTGTTGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3119
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCAAGGAATCAGACGGA
Suggested primer 2:CCACTGACTACGCCACAACT