Insertion junction: CLIP2.043862_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043862
Chromosome:chromosome 17
Location:3142113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720700 ANK14 Predicted protein with ankyrin repeats; (1 of 7) PF12796//PF13637 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGAGGTTCCAGCCATGACTGGTTAGGCGGTGGCTGGGCGGGGGTTGG
Internal bar code:CAAAATCTGTTCTTCCGGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:429
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCCCAACGTGAGCAATG
Suggested primer 2:GATGTGTGGATGACTGCCCA