Insertion junction: CLIP2.043865_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043865
Chromosome:chromosome 17
Location:5758081
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741000 (1 of 1) K13249 - translocon-associated protein subunit alpha (SSR1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGACGTAGTGCGGGCGTATGCGTGCTGGTTCCACCCTGCATAGCTCA
Internal bar code:TGTCGTGGACAAAGATAATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3437
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GACCTGCACACACCTACGAA
Suggested primer 2:GTGGAGTACACCTTCCTGCC