Insertion junction: CLIP2.043870_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043870
Chromosome:chromosome 6
Location:3614998
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278135 RPL21 (1 of 1) K02889 - large subunit ribosomal protein L21e (RP-L21e, RPL21); Cytosolic 80S ribosomal protein L21 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCGCTGTTCTTGGCGGCAGACGCAGCAGCAGCAGCGGGACCAGCCGG
Internal bar code:TGAGAACAAGCGTGTTATTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3054
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGATGCGCTTCTTCATG
Suggested primer 2:AATGCCACCAAGCTGCAAAG