Insertion junction: CLIP2.043878_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043878
Chromosome:chromosome 1
Location:5115049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035750 MSC3 Mechanosensitive ion channel; (1 of 3) PTHR30566 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAGGGTGTGTGTGTGTGCGTTTAGATACCAGCCAAAACTGAATCAAGC
Internal bar code:GGGAGGTTTTGGTATCGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5026
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACCACCACGCGTTTAGC
Suggested primer 2:ACTGTAAGGTTGACGCAGCA