Insertion junction: CLIP2.043880_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043880
Chromosome:chromosome 6
Location:3125205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275500 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGACCATGACCCCGCCGCCGACATGTGATCGAGATCTTAGCCGTGCG
Internal bar code:AAAACGGGCCAGAGATCATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1558
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTACCCGCATACCAGAC
Suggested primer 2:AGCAGCTCCACATGCAGATG