Insertion junction: CLIP2.043882_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043882
Chromosome:chromosome 12
Location:1862052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512250 RRP6b,RRP7 3'-5' endonuclease; (1 of 1) K12591 - exosome complex exonuclease RRP6 (RRP6, EXOSC10) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCCCAGGTGGGGACTGTGCCAGGCAGGGGGCGTGTGCGCGGCATGAG
Internal bar code:ATTGGGGCTGAGCATTCAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:286
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCACGTAGATGAGCTCCG
Suggested primer 2:TTTGCAGCGGAAACATGGTG