Insertion junction: CLIP2.043885_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043885
Chromosome:chromosome 12
Location:5860305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533351 CLPB5 (1 of 3) K03695 - ATP-dependent Clp protease ATP-binding subunit ClpB (clpB); ClpB chaperone, Hsp100 family CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCCGCCGCCGCCTCCTCCTCCGCACGCGCCGCCGCCAAAGCCGTCT
Internal bar code:TTATCTGTAAAGTATAGTTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:552
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTACCTTACCCGTGTGC
Suggested primer 2:GTGGTTGGAGAAGCGGTACA