Insertion junction: CLIP2.043888_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043888
Chromosome:chromosome 2
Location:1140978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080900 PRX4 (1 of 1) PTHR10430//PTHR10430:SF19 - PEROXIREDOXIN // SUBFAMILY NOT NAMED; Peroxiredoxin, type II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATGTAGCCGGGGATGTGTTTCTCCACGCACACCGGCCCGCCAGGGAAG
Internal bar code:CAAAAAGGTTGTCGATCCAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1547
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGAGCCAGCAAGCCATT
Suggested primer 2:TCTTGCGCTAACCAAGGAGG