Insertion junction: CLIP2.043895_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043895
Chromosome:chromosome 17
Location:2381886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714200 KUP2,KUP6,KUP1 (1 of 5) K03549 - KUP system potassium uptake protein (kup); Potassium ion uptake transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACCGCCACCATCACGACCAGGATGAGCAGGGTGGTCAGCACGAACAC
Internal bar code:CCCACGATTGGATTTAATGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2526
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTTTGATACCGATGGCC
Suggested primer 2:TGGTCATGACGTAGATGCCG