Insertion junction: CLIP2.043896_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043896
Chromosome:chromosome 3
Location:2416134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158650 (1 of 274) IPR020683 - Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGCAGACAGTGAGCGTTATACAGGTGTGGCAGTGGTGGGATCGATC
Internal bar code:CACATTACCTGTCAGGATTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1223
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGAGCGTGCTACTAGGC
Suggested primer 2:AGTTGCTGCTCTACGGTGAC