Insertion junction: CLIP2.043899_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043899
Chromosome:chromosome 14
Location:427105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610631 (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain CDS
Cre14.g610647 (1 of 3) PF02209 - Villin headpiece domain (VHP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATGATGTAAACGATGTATTTCTGCGACTGGACCCTAGCAACGAGCAG
Internal bar code:TAAAAGGAAACAATCTGCTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2998
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTAACGTTACCGCCATTG
Suggested primer 2:CACTACGGTATGGTACCCGC