Insertion junction: CLIP2.043915_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043915
Chromosome:chromosome 13
Location:1692142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g574100 (1 of 6) PTHR10994//PTHR10994:SF72 - RETICULON // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCAGGAATGTGAAGGGGCGCCGGTTGCACCAGCGGACACTGTGATAC
Internal bar code:GGGGTAGAGTCGGGTGGGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4120
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCACCTGCTCCAATGACG
Suggested primer 2:CCGCATACACAAGCTCATGC