Insertion junction: CLIP2.043918_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043918
Chromosome:chromosome 8
Location:4123117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383400 SRR11 Scavenger receptor cysteine rich (SRCR) protein; (1 of 2) K13912 - deleted in malignant brain tumors 1 protein (DMBT1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTACTGCCGGCGGCTGACAGACCAGCGGAGCCCGCTCGGTGTGGCGTT
Internal bar code:AGCGTAGGGGTGGTGGTCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:706
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTTCCACTGCCCATAGG
Suggested primer 2:TACGTGCTGTTACTGCTGCA