Insertion junction: CLIP2.043919_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043919
Chromosome:chromosome 13
Location:1879434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575550 (1 of 33) IPR013830 - SGNH hydrolase-type esterase domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAACCGCCGCCCGACCAGCAGCGAGTGAGAGCAGCGCGTAGCACGCGA
Internal bar code:ATTTAGTTTGCTTAGAATGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1357
LEAP-Seq percent confirming:31.5789
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTGCAAAAACGTGGAGG
Suggested primer 2:AAACTCCCCATGCCTGGATG