Insertion junction: CLIP2.043920_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043920
Chromosome:chromosome 3
Location:4550083
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176200 (1 of 1) PTHR22904//PTHR22904:SF364 - TPR REPEAT CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGCGGCGGAAGCGGCACGGTGGAGGCGGCCGGGCTGGCACTGGACC
Internal bar code:GTGCAAGCTGCGGTCGCGGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3037
LEAP-Seq percent confirming:37.6812
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATTGCACTCCCACCCAT
Suggested primer 2:CATGCAGGTGCTGTCCATTG