Insertion junction: CLIP2.043935_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043935
Chromosome:chromosome 2
Location:5487993
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g114350 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCGTGGAGGGCAGCGATGTGCAGCAGCGAATTGCGGTCCTTGCCGTC
Internal bar code:ATTTGGCAAATGATGTCGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:894
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGTGGAAGCTTGCCAAA
Suggested primer 2:TTTTGTCCTCGACCCGTCTG