Insertion junction: CLIP2.043940_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043940
Chromosome:chromosome 10
Location:4845710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453400 MSC4,MSCL1 (1 of 1) PF00924//PF13202 - Mechanosensitive ion channel (MS_channel) // EF hand (EF-hand_5); Predicted protein with mechanosensitive ion channel domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTCCTCAGACGCAGTCGCCCGCTCTTACCTTCCGCTTCTTCAGCGAGT
Internal bar code:CACGATAACGTGCAGAAGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:852
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGTGTGTGTGTGCATG
Suggested primer 2:GAGACGCACGATCTCCTGAG