Insertion junction: CLIP2.043941_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043941
Chromosome:chromosome 6
Location:1319480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g259050 (1 of 1) PTHR24365:SF279 - PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGAGTAACCCTCCCTTCTACTGTCTAAGCACACAACTGCACACACGTG
Internal bar code:TGTCGTGTATTTGGTTAACGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:948
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTACGTTTCTGCTGAGT
Suggested primer 2:TGTTGTGGGTCGACTACACG