Insertion junction: CLIP2.043943_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043943
Chromosome:chromosome 10
Location:2804394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438750 (1 of 1) PTHR31394:SF1 - TRANSMEMBRANE PROTEIN 199 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAGCCTAGGTTGCGGTGCTAGACCAGTGCTCTGTGTGCTGTACCAGGC
Internal bar code:GCAAGGGTAGGCATCTCTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3353
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCAGTCATCCTCTGGGGG
Suggested primer 2:GTCTCTGCCCTCCCTTTTCC