Insertion junction: CLIP2.043945_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043945
Chromosome:chromosome 6
Location:5345340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285001 (1 of 1) PTHR34180//PTHR34180:SF1 - FAMILY NOT NAMED // MUTANT TAN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGACCCTCCGGCCGCTCCCCATCCTGCTGCTGGTTCCCCCTGTGACT
Internal bar code:CCGGTTAGATGGATAGTTCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:723
LEAP-Seq percent confirming:75.8621
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GAATTGAAGGTACCGGCCCA
Suggested primer 2:GGACAAAGTAGACTCGGCCC