Insertion junction: CLIP2.043949_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043949
Chromosome:chromosome 17
Location:5064100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g736300 (1 of 1) IPR000104//IPR011047//IPR018391 - Antifreeze protein, type I // Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTAGCATTGGCCACCAGCCGCCACCTCGACAACGTGTGGGCATGGGTG
Internal bar code:GAAGGTGCCTTCGGGACACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:387
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGACCATGCCCAACTACC
Suggested primer 2:CAGAGGATCGCGACCTGTAC