Insertion junction: CLIP2.043951_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043951
Chromosome:chromosome 16
Location:7633519
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684939 (1 of 4) PTHR11207//PTHR11207:SF0 - RIBONUCLEASE III // RIBONUCLEASE 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTACGGCTTATGCGGCCGCAGCACCGATGAGCCGGCAGGCGCCGAGG
Internal bar code:CGAACACTTCTCTTTATAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:738
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGTCGCTTCTGTGCCTT
Suggested primer 2:CAACCAAGCGGACAGAATGC